Modules Assignment

I have a bit of a trick question. I decided on using ES tool bar as the only menu on my website. The new template (frosty) includes a menu which covers all of the main area e.g. dashboard, my profile, friends, followers, etc.). My problem is that since I have no proper menu items to link a module to, I cannot allocate modules on specific pages. That leaves me with either allowing module to appear on all pages or non!

Does anybody have any idea?